Loading .gitignore 0 → 100644 +1 −0 Original line number Diff line number Diff line build CMakeLists.txt 0 → 100644 +79 −0 Original line number Diff line number Diff line Project (PRODATA) cmake_minimum_required(VERSION 2.8) set(CMAKE_VERBOSE_MAKEFILE OFF) SET(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake) Message (STATUS "PRODATA_BINARY_DIR = " ${PRODATA_BINARY_DIR}) Message (STATUS "PRODATA_SOURCE_DIR = " ${PRODATA_SOURCE_DIR}) Set(CMAKE_C_COMPILER "mpicc") Set(CMAKE_CXX_COMPILER "mpicxx") set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}") set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}") #FIND_PACKAGE( OpenMP REQUIRED) if(OPENMP_FOUND) set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${OpenMP_EXE_LINKER_FLAGS}") message(STATUS "OpenMP_C_FLAGS = " ${OpenMP_C_FLAGS}) message(STATUS "OpenMP_CXX_FLAGS = " ${OpenMP_CXX_FLAGS}) message(STATUS "OpenMP_EXE_LINKER_FLAGS = " ${OpenMP_EXE_LINKER_FLAGS}) endif() Find_Package(GEOS) Message(STATUS "include and lib " ${GEOS_INCLUDE_DIR} " " ${GEOS_LIB_DIR}) IF(GEOS_FOUND) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${GEOS_C_FLAGS}") set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${GEOS_CXX_FLAGS}") set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${GEOS_EXE_LINKER_FLAGS}") message(STATUS "GEOS_C_FLAGS = " ${GEOS_C_FLAGS}) message(STATUS "GEOS_CXX_FLAGS = " ${GEOS_CXX_FLAGS}) message(STATUS "GEOS_EXE_LINKER_FLAGS = " ${GEOS_EXE_LINKER_FLAGS}) Message(STATUS "GEOS_INCLUDE_DIR = " ${GEOS_INCLUDE_DIR}) Message(STATUS "GEOS_LINK_DIR = " ${GEOS_LINK_DIR}) ENDIF(GEOS_FOUND) Message(STATUS "CMAKE_C_FLAGS = " ${CMAKE_C_FLAGS}) Message(STATUS "CMAKE_CXX_FLAGS = " ${CMAKE_CXX_FLAGS}) Message(STATUS "CMAKE_EXE_LINKER_FLAGS = " ${CMAKE_EXE_LINKER_FLAGS}) Add_subdirectory (src bin) if(0) message(STATUS "CMAKE_C_FLAGS = " ${CMAKE_C_FLAGS}) message(STATUS "CMAKE_C_FLAGS_DEBUG = " ${CMAKE_C_FLAGS_DEBUG}) message(STATUS "CMAKE_C_FLAGS_MINSIZEREL = " ${CMAKE_C_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_C_FLAGS_RELEASE = " ${CMAKE_C_FLAGS_RELEASE}) message(STATUS "CMAKE_C_FLAGS_RELWITHDEBINFO = " ${CMAKE_C_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_CXX_FLAGS = " ${CMAKE_CXX_FLAGS}) message(STATUS "CMAKE_CXX_FLAGS_DEBUG = " ${CMAKE_CXX_FLAGS_DEBUG}) message(STATUS "CMAKE_CXX_FLAGS_MINSIZEREL = " ${CMAKE_CXX_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_CXX_FLAGS_RELEASE = " ${CMAKE_CXX_FLAGS_RELEASE}) message(STATUS "CMAKE_CXX_FLAGS_RELWITHDEBINFO = " ${CMAKE_CXX_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_EXE_LINKER_FLAGS = " ${CMAKE_EXE_LINKER_FLAGS}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_DEBUG = " ${CMAKE_EXE_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_EXE_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_RELEASE = " ${CMAKE_EXE_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_EXE_LINKER_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS = " ${CMAKE_MODULE_LINKER_FLAGS}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_DEBUG = " ${CMAKE_MODULE_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_RELEASE = " ${CMAKE_MODULE_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS = " ${CMAKE_SHARED_LINKER_FLAGS}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_DEBUG = " ${CMAKE_SHARED_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_RELEASE = " ${CMAKE_SHARED_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS = " ${CMAKE_STATIC_LINKER_FLAGS}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_DEBUG = " ${CMAKE_STATIC_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_RELEASE = " ${CMAKE_STATIC_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO}) endif() cmake/FindGEOS.cmake 0 → 100644 +17 −0 Original line number Diff line number Diff line FIND_PATH(GEOS_INCLUDE_DIR geos.h /usr/include/geos /usr/local/include/geos) FIND_LIBRARY(GEOS_LIBRARY NAMES geos PATH /usr/lib /usr/local/lib /usr/lib64) FIND_PATH(GEOS_LINK_DIR libgeos.so /usr/lib/geos /usr/local/lib /usr/local/lib/geos /usr/lib64) IF (GEOS_INCLUDE_DIR AND GEOS_LIBRARY) SET(GEOS_FOUND TRUE) ENDIF (GEOS_INCLUDE_DIR AND GEOS_LIBRARY) IF (GEOS_FOUND) IF (NOT GEOS_FIND_QUIETLY) MESSAGE(STATUS "Found Hello: ${GEOS_LIBRARY}") ENDIF (NOT GEOS_FIND_QUIETLY) ELSE (GEOS_FOUND) IF (GEOS_FIND_REQUIRED) MESSAGE(FATAL_ERROR "Could not find geos library!") ENDIF (GEOS_FIND_REQUIRED) ENDIF (GEOS_FOUND) include/Home.h 0 → 100644 +80 −0 Original line number Diff line number Diff line #ifndef _HOME_h #define _HOME_h #include <stdio.h> #include <stdarg.h> #include <unistd.h> #include <errno.h> #include <math.h> #include <time.h> #include <vector> #include <string> #include <cstring> #include <string> #include <vector> #define real8 double using namespace std; /* * Define a structure containing all items corresponding to * all command line options that have associated values. This * gives us an easy way to pass the command line arg values around * to various functions. */ typedef struct { double burgMag; int seed; int type; std::vector<string> inpFiles; std::vector<string> outFiles; }InArgs_t; /* * Define a structure to hold a nodal configuration type, name, and * a pointer to the function to invoke to create that type of nodal * configuration. */ typedef struct { int funcType; const char *funcName; /* void (* func)(); */ } FuncData_t; /* * Define an integer identifier to be associated with each * posible command line argument. To be used to index the * option-specific data in the optList array below. */ typedef enum{ OPT_HELP, OPT_INPFILE, OPT_OUTFILE, OPT_SEED, OPT_TYPE, OPT_MAX }OPT_t; typedef enum{ FTYPE_AVERAGE_LINES = 0, FTYPE_PROC_EXTEND_DIS, FTYPE_MAX }FTYPE_t; /* * Define a structure to hold a command line option's id (type), * name, the shortest possible unique abbreviation of the option * name, and the number of parameters paired with the opt. */ typedef struct { int optType; const char *optName; int optMinAbbrev; int optPaired; } Option_t; #endif src/CMakeLists.txt 0 → 100644 +14 −0 Original line number Diff line number Diff line Set (SRCS Main.cpp ) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O3 -Wno-unknown-pragmas -DPARALLEL=1 " ) set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -O3 " ) set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ") add_executable(prodata ${SRCS}) add_definitions( -DPARALLEL=1) INCLUDE_DIRECTORIES(../include) target_link_libraries(prodata m pthread) Install(TARGETS prodata RUNTIME DESTINATION ${PARADIS_SOURCE_DIR}/bin) Loading
CMakeLists.txt 0 → 100644 +79 −0 Original line number Diff line number Diff line Project (PRODATA) cmake_minimum_required(VERSION 2.8) set(CMAKE_VERBOSE_MAKEFILE OFF) SET(CMAKE_MODULE_PATH ${PROJECT_SOURCE_DIR}/cmake) Message (STATUS "PRODATA_BINARY_DIR = " ${PRODATA_BINARY_DIR}) Message (STATUS "PRODATA_SOURCE_DIR = " ${PRODATA_SOURCE_DIR}) Set(CMAKE_C_COMPILER "mpicc") Set(CMAKE_CXX_COMPILER "mpicxx") set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${OpenMP_C_FLAGS}") set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${OpenMP_CXX_FLAGS}") #FIND_PACKAGE( OpenMP REQUIRED) if(OPENMP_FOUND) set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${OpenMP_EXE_LINKER_FLAGS}") message(STATUS "OpenMP_C_FLAGS = " ${OpenMP_C_FLAGS}) message(STATUS "OpenMP_CXX_FLAGS = " ${OpenMP_CXX_FLAGS}) message(STATUS "OpenMP_EXE_LINKER_FLAGS = " ${OpenMP_EXE_LINKER_FLAGS}) endif() Find_Package(GEOS) Message(STATUS "include and lib " ${GEOS_INCLUDE_DIR} " " ${GEOS_LIB_DIR}) IF(GEOS_FOUND) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${GEOS_C_FLAGS}") set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${GEOS_CXX_FLAGS}") set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} ${GEOS_EXE_LINKER_FLAGS}") message(STATUS "GEOS_C_FLAGS = " ${GEOS_C_FLAGS}) message(STATUS "GEOS_CXX_FLAGS = " ${GEOS_CXX_FLAGS}) message(STATUS "GEOS_EXE_LINKER_FLAGS = " ${GEOS_EXE_LINKER_FLAGS}) Message(STATUS "GEOS_INCLUDE_DIR = " ${GEOS_INCLUDE_DIR}) Message(STATUS "GEOS_LINK_DIR = " ${GEOS_LINK_DIR}) ENDIF(GEOS_FOUND) Message(STATUS "CMAKE_C_FLAGS = " ${CMAKE_C_FLAGS}) Message(STATUS "CMAKE_CXX_FLAGS = " ${CMAKE_CXX_FLAGS}) Message(STATUS "CMAKE_EXE_LINKER_FLAGS = " ${CMAKE_EXE_LINKER_FLAGS}) Add_subdirectory (src bin) if(0) message(STATUS "CMAKE_C_FLAGS = " ${CMAKE_C_FLAGS}) message(STATUS "CMAKE_C_FLAGS_DEBUG = " ${CMAKE_C_FLAGS_DEBUG}) message(STATUS "CMAKE_C_FLAGS_MINSIZEREL = " ${CMAKE_C_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_C_FLAGS_RELEASE = " ${CMAKE_C_FLAGS_RELEASE}) message(STATUS "CMAKE_C_FLAGS_RELWITHDEBINFO = " ${CMAKE_C_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_CXX_FLAGS = " ${CMAKE_CXX_FLAGS}) message(STATUS "CMAKE_CXX_FLAGS_DEBUG = " ${CMAKE_CXX_FLAGS_DEBUG}) message(STATUS "CMAKE_CXX_FLAGS_MINSIZEREL = " ${CMAKE_CXX_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_CXX_FLAGS_RELEASE = " ${CMAKE_CXX_FLAGS_RELEASE}) message(STATUS "CMAKE_CXX_FLAGS_RELWITHDEBINFO = " ${CMAKE_CXX_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_EXE_LINKER_FLAGS = " ${CMAKE_EXE_LINKER_FLAGS}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_DEBUG = " ${CMAKE_EXE_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_EXE_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_RELEASE = " ${CMAKE_EXE_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_EXE_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_EXE_LINKER_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS = " ${CMAKE_MODULE_LINKER_FLAGS}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_DEBUG = " ${CMAKE_MODULE_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_MODULE_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_RELEASE = " ${CMAKE_MODULE_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_MODULE_LINKER_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS = " ${CMAKE_SHARED_LINKER_FLAGS}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_DEBUG = " ${CMAKE_SHARED_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_SHARED_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_RELEASE = " ${CMAKE_SHARED_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_SHARED_LINKER_FLAGS_RELWITHDEBINFO}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS = " ${CMAKE_STATIC_LINKER_FLAGS}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_DEBUG = " ${CMAKE_STATIC_LINKER_FLAGS_DEBUG}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL = " ${CMAKE_STATIC_LINKER_FLAGS_MINSIZEREL}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_RELEASE = " ${CMAKE_STATIC_LINKER_FLAGS_RELEASE}) message(STATUS "CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO = " ${CMAKE_STATIC_LINKER_FLAGS_RELWITHDEBINFO}) endif()
cmake/FindGEOS.cmake 0 → 100644 +17 −0 Original line number Diff line number Diff line FIND_PATH(GEOS_INCLUDE_DIR geos.h /usr/include/geos /usr/local/include/geos) FIND_LIBRARY(GEOS_LIBRARY NAMES geos PATH /usr/lib /usr/local/lib /usr/lib64) FIND_PATH(GEOS_LINK_DIR libgeos.so /usr/lib/geos /usr/local/lib /usr/local/lib/geos /usr/lib64) IF (GEOS_INCLUDE_DIR AND GEOS_LIBRARY) SET(GEOS_FOUND TRUE) ENDIF (GEOS_INCLUDE_DIR AND GEOS_LIBRARY) IF (GEOS_FOUND) IF (NOT GEOS_FIND_QUIETLY) MESSAGE(STATUS "Found Hello: ${GEOS_LIBRARY}") ENDIF (NOT GEOS_FIND_QUIETLY) ELSE (GEOS_FOUND) IF (GEOS_FIND_REQUIRED) MESSAGE(FATAL_ERROR "Could not find geos library!") ENDIF (GEOS_FIND_REQUIRED) ENDIF (GEOS_FOUND)
include/Home.h 0 → 100644 +80 −0 Original line number Diff line number Diff line #ifndef _HOME_h #define _HOME_h #include <stdio.h> #include <stdarg.h> #include <unistd.h> #include <errno.h> #include <math.h> #include <time.h> #include <vector> #include <string> #include <cstring> #include <string> #include <vector> #define real8 double using namespace std; /* * Define a structure containing all items corresponding to * all command line options that have associated values. This * gives us an easy way to pass the command line arg values around * to various functions. */ typedef struct { double burgMag; int seed; int type; std::vector<string> inpFiles; std::vector<string> outFiles; }InArgs_t; /* * Define a structure to hold a nodal configuration type, name, and * a pointer to the function to invoke to create that type of nodal * configuration. */ typedef struct { int funcType; const char *funcName; /* void (* func)(); */ } FuncData_t; /* * Define an integer identifier to be associated with each * posible command line argument. To be used to index the * option-specific data in the optList array below. */ typedef enum{ OPT_HELP, OPT_INPFILE, OPT_OUTFILE, OPT_SEED, OPT_TYPE, OPT_MAX }OPT_t; typedef enum{ FTYPE_AVERAGE_LINES = 0, FTYPE_PROC_EXTEND_DIS, FTYPE_MAX }FTYPE_t; /* * Define a structure to hold a command line option's id (type), * name, the shortest possible unique abbreviation of the option * name, and the number of parameters paired with the opt. */ typedef struct { int optType; const char *optName; int optMinAbbrev; int optPaired; } Option_t; #endif
src/CMakeLists.txt 0 → 100644 +14 −0 Original line number Diff line number Diff line Set (SRCS Main.cpp ) set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -O3 -Wno-unknown-pragmas -DPARALLEL=1 " ) set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -O3 " ) set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ") add_executable(prodata ${SRCS}) add_definitions( -DPARALLEL=1) INCLUDE_DIRECTORIES(../include) target_link_libraries(prodata m pthread) Install(TARGETS prodata RUNTIME DESTINATION ${PARADIS_SOURCE_DIR}/bin)