restarting test works

import sys

import numpy as np

import mechnet as mn

import shutil

from multiprocessing import Pool

sys.path.append("/home/lpyka/hierarchical_interface/")

from lib.push_data import push_data_to, copy_runfile_to 

def rerun_simulation(restart_data_zipped):

    seed = restart_data_zipped[0]

    filepath = restart_data_zipped[1]

    path_to_simdata_group = restart_data_zipped[2]

    targetdirectory = restart_data_zipped[3]

    simulationparameters = mn.datman.get_restart_simdata(filepath,path_to_simdata_group,readpickled=True)

    #regenerate fitting simulation object

    #automatic construction based on filename and included documentation

    simulation = mn.datman.get_restart_simulation_object(filepath, path_to_simdata_group)

    #restart the simulation; if needed hidden_parameters (typically Python

    #objects like shared variables for communication between parallel processes)

    #reinitialize those and provide them here

    simdata = simulation.restart_simulation(simulationparameters, maximum_runtime=2*85800)

    simdata_dict = simdata.get_simdata_dict()

    #get a network descriptor from reading the provided file (allows for simple use of the

    #same function for saving data as beforehand)

    network_descriptor_dict = mn.datman.get_restart_parameter_documentation(filepath, path_to_simdata_group)

    mn.datman.save_simulation_output(network_descriptor_dict, simdata_dict, simulation.simulationname, simulation.simulationdoc,

                                     suffix=str(seed), overwritemode = True, targetdirectory = targetdirectory)

    print("done with sim of seed", seed)

    return (network_descriptor_dict, simdata_dict, simulation.simulationname, simulation.simulationdoc)

if __name__ == "__main__":

    list_of_seeds =  []

    offset = 5

    crack_length = 1 

    restart_data_zipped = []

    seed = 1000

    targetdirectory = f"/FASTTEMP/p7/lpyka/hierarchical_interface/dummy_test/test/a_{crack_length}/"

    filepath = targetdirectory + f"FDB_PARSOL_SIRC-FCVC_SOG-IVCG_HFBA_CPC-NIC_-_{seed}.h5"

    grouppath_bundle = mn.datman.bundle_all_sub_groups(filepath, ["simulationdata"], flaglist=[["partial", True]])

    path_to_simdata_group = grouppath_bundle[0]

    restart_data_zipped.extend([seed, filepath, path_to_simdata_group , targetdirectory])

    results = rerun_simulation(restart_data_zipped)

    #for data in results:

    #    mn.datman.save_simulation_output(data[0], data[1], data[2], data[3], targetdirectory=destination, suffix="", overwritemode=False)

    #print(data[1]["current_data"]["stiffnessmatrix"].toarray())

    copy_runfile_to(runfile_name=__file__, destination=targetdirectory)

    print(f"done with crack_length {crack_length}")

    print("\nRun successfull.")