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#!/bin/bash -l
#
# allocate 16 nodes (64 CPUs) for 6 hours
#PBS -l nodes=4:ppn=40,walltime=16:00:00
#
# job name
#PBS -N TestAval
#
# stdout and stderr files
#PBS -o aval.out -e aval.err
#
# first non-empty non-comment line ends PBS options
# jobs always start in $HOME -
# change to a temporary job directory on $FASTTMP
# copy input file from location where job was submitted
EXEC="$HOME/Projects/hmn-percolation/percolation"
INPUTFILE='FileReaderTestInput.txt'
SIMPATH="$HOME/Projects/hmn-percolation/Results/alpha10/20/p045"
# run
HOSTN=$(hostname)
if [ ! "${HOSTN#ww8}" == "$(hostname)" ]; then
module load intel
cd $SIMPATH
echo "Hi: $SIMPATH/$INPUTFILE"
$EXEC "$SIMPATH/$INPUTFILE"
else
mkdir ${HOME}/$PBS_JOBID
cd ${HOME}/$PBS_JOBID
module load intel64
module load intelmpi
module load mkl
mpirun_rrze -npernode 20 $EXEC -in $SIMPATH/$INPUTFILE
cp processed_data.dat $SIMPATH
cd
# get rid of the temporary job dir
rm -rf ${HOME}/$PBS_JOBID
fi
# save output on parallel file system
#mkdir -p ${HOME}/codes/SIMSRC/$PBS_JOBID